Previous conda installation workflow not compatible with PyMOL 2.5
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For PyMOL 2.5: Transition from previous versions may not work. All dependencies, including python, are based off of conda-forge. More information
Remove all relevant dependencies or create a new environment and:
conda install -c schrodinger -c conda-forge pymol
conda install -c schrodinger -c conda-forge pymol-bundle
On macOS: Movie export with
The on-demand installation of ffmpeg may install an incompatible version (Error message:
dyld: Library not loaded: @rpath/libopenh264.5.dylib). This can be fixed by running the following command in a terminal:
/Applications/PyMOL.app/Contents/bin/conda install conda-forge::ffmpeg
On Windows with Intel Graphics: Colors are faded (issue #15)
precomputed_lighting setting (fixed in PyMOL 2.3.0)
Pymol Viewer For Windows 10
Quad-buffered stereo not auto-detected on Linux
Fixed in 2.1.0, please download the new version.
Also make sure your conda environment has pyqt=5.6 (not 5.9).
With pyqt>=5.9 you need to launch PyMOL with
On Windows, some “legacy” plugin windows (e.g. APBS Tools2.1) can't be moved or resized
Fixed in 2.4.0, please download the new version.
Download Pymol Free Software For Windows 10
.pymolpluginsrc.py invalid syntax error on startup
Remove the file
~/.pymolpluginsrc.py (fixed in PyMOL 2.3.1)
On Windows: UnicodeDecodeError on startup
Remove the file
%USERPROFILE%.pymolwinfiletypes_done.txt (fixed in PyMOL 2.3.1)
Issue on a default Fedora installation. Please do
sudo dnf install libnsl